BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F08LP1|AL428090
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1867 0.0
3x_Contig66 612 e-175
>3x_Contig1530
Length = 6216
Score = 1867 bits (940), Expect = 0.0
Identities = 945/948 (99%)
Strand = Plus / Minus
Query: 4 cctcaaattccgaggacctaaaggatcgataggccacactttcatggtttgtattcacac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 cctcaaattccgaggacctaaaggatcgataggccacactttcatggtttgtattcacac 4763
Query: 64 tgaaaatcaaaatcaaggggacttttacccttttgttctactggagatttctgttctcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 tgaaaatcaaaatcaaggggacttttacccttttgttctactggagatttctgttctcca 4703
Query: 124 tgagtcccccttaggacatctgcgttatcgtttaacagatgtgccgccccagccaaactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 tgagtcccccttaggacatctgcgttatcgtttaacagatgtgccgccccagccaaactc 4643
Query: 184 cccacctgacaatgtcttcaacccggatcagcccgtataggactttgaatgctagaacgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4642 cccacctgacaatgtcttcaacccggatcagcccgtataggactttgaatgctagaacgt 4583
Query: 244 ggaaaatgaattccagctccgcttaattgaataagtaaagaaactataaaggtagtggta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4582 ggaaaatgaattccagctccgcttaattgaataagtaaagaaactataaaggtagtggta 4523
Query: 304 tttcactggcgccgaagctcccacttatgctacaccctctatgtctcttcacaatgtcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4522 tttcactggcgccgaagctcccacttatgctacaccctctatgtctcttcacaatgtcaa 4463
Query: 364 actagagtcaagctcaacagggtcttctttccccgctgattctgccaagcccgttccctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4462 actagagtcaagctcaacagggtcttctttccccgctgattctgccaagcccgttccctt 4403
Query: 424 ggctgtggtttcgctagatagtagatagggacagtgggaatctcgttaatccattcatgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 ggctgtggtttcgctagatagtagatagggacagtgggaatctcgttaatccattcatgc 4343
Query: 484 gcgtcactaattagatgacgaggcatttggctaccttaagagagttatagttactcccgc 543
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4342 gcgtcactaattagatgacgaggcatttggctaccttaagagagtcatagttactcccgc 4283
Query: 544 cgtttacccgcgcttggttgaatttcttcactttgacattcagagcactgggcagaaatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 cgtttacccgcgcttggttgaatttcttcactttgacattcagagcactgggcagaaatc 4223
Query: 604 acattgcgtcaacatcactttctgaccatcgcaatgctatgttttaattagacagtcaga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4222 acattgcgtcaacatcactttctgaccatcgcaatgctatgttttaattagacagtcaga 4163
Query: 664 ttccccttgtccgtaccagttctaagttgatcgttaattgcagcaagcgacggtctacaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4162 ttccccttgtccgtaccagttctaagttgatcgttaattgcagcaagcgacggtctacaa 4103
Query: 724 gagacctaccaaggccgtctacgacaaggcccgcaagcagtccgtcccaccgagcaagcc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4102 gagacctaccaaggccgtctacgacaaggcccgcaagcagtccgtcccaccgagcaagcc 4043
Query: 784 cagtaagacagtycacaagcatgcccgccgcgtctgaccaaggccctcactgcccgatcc 843
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4042 cagtaagacagtccacaagcatgcccgccgcgtctgaccaaggccctcactgcccgatcc 3983
Query: 844 ttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatctacat 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3982 ttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatctacat 3923
Query: 904 tattctatcaactagaggctgttcaccttggagacctgcygcggttat 951
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3922 tattctatcaactagaggctgttcaccttggagacctgctgcggttat 3875
>3x_Contig66
Length = 1023
Score = 612 bits (308), Expect = e-175
Identities = 317/320 (99%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 633 cgcaatgctatgttttaattagacagtcagattccccttg-tccgtaccagttctaagtt 691
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4 cgcaatgctatgttttaattagacagtcagattccccttggtccgtaccagttctaagtt 63
Query: 692 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 123
Query: 752 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtycacaagcatgcccgc 811
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 124 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 183
Query: 812 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 243
Query: 872 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 303
Query: 932 tggagacctgcygcggttat 951
||||||||||| ||||||||
Sbjct: 304 tggagacctgctgcggttat 323
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4266
Number of Sequences: 1807
Number of extensions: 4266
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 2
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)